Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HIST3H2BA-201ENST00000436555 524 ntBASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SNHG9-202ENST00000564014 471 ntBASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC023024.2-201ENST00000623561 1993 ntBASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 KRT8P44-201ENST00000441609 1350 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AL035456.1-201ENST00000456064 1369 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SPDYE17-201ENST00000412399 783 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AC254562.1-201ENST00000417586 456 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AC027612.4-201ENST00000605371 583 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AL589739.1-201ENST00000607720 493 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AP001059.3-201ENST00000619053 235 ntBASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00346Q8IVM7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00346Q8IVM7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms