Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NUDCD3Q8IVD9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 KRT19P2-202ENST00000557173 1012 ntBASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 FOXO1B-201ENST00000504678 1527 ntBASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 CICP14-201ENST00000629111 2732 ntBASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.57■□□□□ 0.08
NUDCD3Q8IVD9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 AC140479.7-201ENST00000636301 2332 ntBASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 RNA5SP410-201ENST00000516285 106 ntBASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 WASH3P-207ENST00000560956 1394 ntBASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 FO538757.1-201ENST00000623083 1397 ntBASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms