Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME9Q86XW9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME9Q86XW9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.81■□□□□ 0.92
NME9Q86XW9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.8■□□□□ 0.92
NME9Q86XW9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 HLA-K-203ENST00000430151 1046 ntBASIC20.8■□□□□ 0.92
NME9Q86XW9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.8■□□□□ 0.92
NME9Q86XW9 AP001258.2-201ENST00000529891 490 ntBASIC20.8■□□□□ 0.92
NME9Q86XW9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NME9Q86XW9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.8■□□□□ 0.92
NME9Q86XW9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.8■□□□□ 0.92
NME9Q86XW9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME9Q86XW9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.8■□□□□ 0.92
NME9Q86XW9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.8■□□□□ 0.92
NME9Q86XW9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.79■□□□□ 0.92
NME9Q86XW9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NME9Q86XW9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.79■□□□□ 0.92
NME9Q86XW9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.79■□□□□ 0.92
NME9Q86XW9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NME9Q86XW9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.79■□□□□ 0.92
NME9Q86XW9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME9Q86XW9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NME9Q86XW9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 AC099398.1-201ENST00000567919 2776 ntBASIC20.78■□□□□ 0.92
NME9Q86XW9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.78■□□□□ 0.92
NME9Q86XW9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.78■□□□□ 0.92
NME9Q86XW9 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.78■□□□□ 0.92
NME9Q86XW9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 HSPB1P2-201ENST00000448722 546 ntBASIC20.78■□□□□ 0.92
NME9Q86XW9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.78■□□□□ 0.92
NME9Q86XW9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.78■□□□□ 0.92
NME9Q86XW9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NME9Q86XW9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.78■□□□□ 0.92
NME9Q86XW9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.78■□□□□ 0.92
NME9Q86XW9 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms