Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SPDYE11-202ENST00000450699 704 ntBASIC13.97□□□□□ -0.17
LRRC28Q86X40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SPDYE9P-201ENST00000570642 692 ntBASIC13.97□□□□□ -0.17
LRRC28Q86X40 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 AC004835.2-201ENST00000603762 682 ntBASIC13.97□□□□□ -0.17
LRRC28Q86X40 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SPDYE10P-202ENST00000612005 668 ntBASIC13.97□□□□□ -0.17
LRRC28Q86X40 SPDYE8P-202ENST00000612377 668 ntBASIC13.97□□□□□ -0.17
LRRC28Q86X40 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRC28Q86X40 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 RN7SL589P-201ENST00000481268 310 ntBASIC13.96□□□□□ -0.17
LRRC28Q86X40 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.96□□□□□ -0.17
LRRC28Q86X40 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRC28Q86X40 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms