Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 CICP23-201ENST00000605013 2741 ntBASIC14.12□□□□□ -0.15
RFPL4BQ6ZWI9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL4BQ6ZWI9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL4BQ6ZWI9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL4BQ6ZWI9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL589702.1-201ENST00000641229 1509 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL627223.1-201ENST00000416693 442 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 KRT18P32-201ENST00000424695 1287 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 SLC25A39P2-201ENST00000537614 270 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 KRT8P23-201ENST00000560090 1207 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AC004835.2-201ENST00000603762 682 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 AL596442.2-201ENST00000610240 980 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL4BQ6ZWI9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 AC254562.1-201ENST00000417586 456 ntBASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 RPS8P6-201ENST00000426177 609 ntBASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 CNN2P11-201ENST00000429351 262 ntBASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL4BQ6ZWI9 DNAJB3-202ENST00000449667 1266 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms