Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AC016027.1-202ENST00000607927 1699 ntBASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AKAP8P1-201ENST00000434743 1349 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 MBLAC2-202ENST00000514906 1936 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AL671277.1-201ENST00000429656 993 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 AC005829.1-201ENST00000570002 483 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM53Q6P2H8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms