Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMBOX1Q6NT76 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.85□□□□□ -0.03
HMBOX1Q6NT76 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AL589702.1-201ENST00000641229 1509 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AL645728.2-201ENST00000641974 660 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 BCAR1-209ENST00000546196 1340 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AL928921.2-201ENST00000641325 2442 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 AC010327.5-201ENST00000586923 3061 ntBASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.84□□□□□ -0.03
HMBOX1Q6NT76 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMBOX1Q6NT76 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 RHOQP3-201ENST00000437982 621 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 DNAJB3-202ENST00000449667 1266 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AL031432.2-201ENST00000566714 459 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AL928711.1-201ENST00000570165 459 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC092364.2-202ENST00000597012 1073 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC004877.2-201ENST00000623941 599 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 KRT18P28-201ENST00000453838 1332 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 AC136759.1-202ENST00000530858 2194 ntBASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.83□□□□□ -0.04
HMBOX1Q6NT76 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMBOX1Q6NT76 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMBOX1Q6NT76 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
HMBOX1Q6NT76 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMBOX1Q6NT76 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMBOX1Q6NT76 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms