Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AL031284.1-201ENST00000419297 478 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TPM4P1-201ENST00000436100 807 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC092910.1-201ENST00000482027 1129 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC093909.1-201ENST00000504731 1122 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC010327.5-201ENST00000586923 3061 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC005252.3-201ENST00000623855 2258 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AC009090.5-201ENST00000624886 2285 ntBASIC12.49□□□□□ -0.41
FAM78BQ5VT40 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM78BQ5VT40 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms