Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF736P11Y-201ENST00000442535 1213 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF736P12Y-201ENST00000443152 1243 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 CSF2RBP1-201ENST00000447905 391 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF736P4Y-201ENST00000454995 1243 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 FO681548.1-201ENST00000455617 1132 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AP005019.2-201ENST00000615104 511 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.48■□□□□ 0.23
VARS2Q5ST30 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 KRT90P-201ENST00000549264 1064 ntBASIC16.48■□□□□ 0.23
VARS2Q5ST30 BX539320.1-201ENST00000623759 877 ntBASIC16.48■□□□□ 0.23
VARS2Q5ST30 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
VARS2Q5ST30 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARS2Q5ST30 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms