Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.87■□□□□ 0.45
USH1GQ495M9 AC022210.1-201ENST00000449856 793 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.87■□□□□ 0.45
USH1GQ495M9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.87■□□□□ 0.45
USH1GQ495M9 AC025181.2-201ENST00000606994 802 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 MIR6805-201ENST00000615055 62 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 AC092850.2-201ENST00000623821 2697 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 AL365203.3-201ENST00000609742 2057 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 KRT43P-201ENST00000434019 910 ntBASIC17.86■□□□□ 0.45
USH1GQ495M9 AC093433.1-201ENST00000458048 571 ntBASIC17.86■□□□□ 0.45
USH1GQ495M9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
USH1GQ495M9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.86■□□□□ 0.45
USH1GQ495M9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.86■□□□□ 0.45
USH1GQ495M9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 AC093813.1-201ENST00000605066 256 ntBASIC17.86■□□□□ 0.45
USH1GQ495M9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USH1GQ495M9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.86■□□□□ 0.45
USH1GQ495M9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1GQ495M9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1GQ495M9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
USH1GQ495M9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
USH1GQ495M9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USH1GQ495M9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.85■□□□□ 0.45
USH1GQ495M9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.85■□□□□ 0.45
USH1GQ495M9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.85■□□□□ 0.45
USH1GQ495M9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.85■□□□□ 0.45
USH1GQ495M9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.85■□□□□ 0.45
USH1GQ495M9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.85■□□□□ 0.45
USH1GQ495M9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.85■□□□□ 0.45
USH1GQ495M9 AP001889.1-201ENST00000525414 633 ntBASIC17.85■□□□□ 0.45
USH1GQ495M9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
USH1GQ495M9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USH1GQ495M9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.85■□□□□ 0.45
USH1GQ495M9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1GQ495M9 AC134312.5-201ENST00000568031 1313 ntBASIC17.85■□□□□ 0.45
USH1GQ495M9 AP001063.1-201ENST00000568332 529 ntBASIC17.85■□□□□ 0.45
USH1GQ495M9 MIR4259-201ENST00000584466 101 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms