Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 NUS1P3-201ENST00000423502 862 ntBASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 BCRP2-202ENST00000447763 634 ntBASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 AC004066.1-201ENST00000502488 802 ntBASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 BCRP6-201ENST00000510112 632 ntBASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 BCRP7-201ENST00000511549 544 ntBASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
DCAF4L1Q3SXM0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 AC093525.8-201ENST00000624099 1342 ntBASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 CROCCP4-201ENST00000457096 498 ntBASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 MSTO2P-201ENST00000314835 1709 ntBASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCAF4L1Q3SXM0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DCAF4L1Q3SXM0 AL645937.2-201ENST00000396808 931 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms