Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.51■□□□□ 0.55
PDS5AQ29RF7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 FAM86MP-201ENST00000340703 885 ntBASIC18.5■□□□□ 0.55
PDS5AQ29RF7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 LINC02199-201ENST00000506655 2702 ntBASIC18.5■□□□□ 0.55
PDS5AQ29RF7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 AC020658.6-201ENST00000623564 1870 ntBASIC18.5■□□□□ 0.55
PDS5AQ29RF7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PCDHA1-201ENST00000378133 2726 ntBASIC18.5■□□□□ 0.55
PDS5AQ29RF7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDS5AQ29RF7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC245100.3-201ENST00000441281 285 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 FAM86HP-204ENST00000513466 959 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 C2orf69P2-201ENST00000562032 1123 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC010328.2-201ENST00000597698 1111 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 ECM1P1-201ENST00000604092 1279 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 POM121L8P-201ENST00000417732 1281 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 POM121L9P-203ENST00000441984 1285 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.49■□□□□ 0.55
PDS5AQ29RF7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.49■□□□□ 0.55
PDS5AQ29RF7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms