Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TFF3Q07654 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 C2orf27AP3-201ENST00000434123 579 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC006033.1-201ENST00000440505 426 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.71□□□□□ -0.21
TFF3Q07654 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.71□□□□□ -0.21
TFF3Q07654 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC093813.1-201ENST00000605066 256 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.71□□□□□ -0.21
TFF3Q07654 AC091271.1-201ENST00000611877 1162 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 AL354718.3-201ENST00000616414 581 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 CR382287.1-201ENST00000623954 586 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TFF3Q07654 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.71□□□□□ -0.21
TFF3Q07654 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.71□□□□□ -0.21
TFF3Q07654 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.71□□□□□ -0.21
TFF3Q07654 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TFF3Q07654 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.71□□□□□ -0.22
TFF3Q07654 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TFF3Q07654 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.71□□□□□ -0.22
TFF3Q07654 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.71□□□□□ -0.22
TFF3Q07654 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TFF3Q07654 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TFF3Q07654 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TFF3Q07654 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 AC022188.1-201ENST00000620960 1664 ntBASIC13.7□□□□□ -0.22
TFF3Q07654 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 AC004945.1-201ENST00000416738 983 ntBASIC13.7□□□□□ -0.22
TFF3Q07654 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 KRT8P13-201ENST00000463294 1010 ntBASIC13.7□□□□□ -0.22
TFF3Q07654 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.7□□□□□ -0.22
TFF3Q07654 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.7□□□□□ -0.22
TFF3Q07654 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 AC025279.2-201ENST00000569730 653 ntBASIC13.7□□□□□ -0.22
TFF3Q07654 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.7□□□□□ -0.22
TFF3Q07654 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.7□□□□□ -0.22
TFF3Q07654 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TFF3Q07654 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TFF3Q07654 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.7□□□□□ -0.22
TFF3Q07654 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms