Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX6-1P78426 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX6-1P78426 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 SLC7A15P-201ENST00000424028 1363 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 OR2I1P-209ENST00000641730 5365 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 OR2I1P-210ENST00000642037 4691 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 AC004987.2-201ENST00000395959 1148 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 AC234783.1-201ENST00000441761 496 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 SERBP1P3-201ENST00000459980 809 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 RN7SL837P-201ENST00000463010 287 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 AC055876.2-201ENST00000531834 546 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 AC243562.2-201ENST00000561247 970 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-1P78426 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 AL606495.2-201ENST00000605867 535 ntBASIC13.84□□□□□ -0.19
NKX6-1P78426 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-1P78426 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-1P78426 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-1P78426 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
NKX6-1P78426 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.83□□□□□ -0.19
NKX6-1P78426 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-1P78426 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.83□□□□□ -0.19
NKX6-1P78426 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-1P78426 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-1P78426 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-1P78426 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.83□□□□□ -0.19
NKX6-1P78426 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms