Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPS3AP61247 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.75□□□□□ -0.05
RPS3AP61247 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPS3AP61247 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RPS3AP61247 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPS3AP61247 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPS3AP61247 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.75□□□□□ -0.05
RPS3AP61247 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.75□□□□□ -0.05
RPS3AP61247 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.75□□□□□ -0.05
RPS3AP61247 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPS3AP61247 LINC00552-201ENST00000625151 2579 ntBASIC14.75□□□□□ -0.05
RPS3AP61247 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RPS3AP61247 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS3AP61247 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 MIR600HG-201ENST00000449175 5984 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RPS3AP61247 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 HLA-H-201ENST00000383620 1096 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS3AP61247 AC142381.1-201ENST00000426099 345 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 FAM58DP-201ENST00000428076 619 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 CNN2P2-201ENST00000443536 909 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS3AP61247 FAM86GP-201ENST00000448322 971 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 CNN2P3-201ENST00000450201 906 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 AC098859.1-201ENST00000502915 1238 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 ALG1L8P-201ENST00000533887 760 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 AL136317.3-201ENST00000618497 906 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.74□□□□□ -0.05
RPS3AP61247 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS3AP61247 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS3AP61247 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS3AP61247 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS3AP61247 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RPS3AP61247 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS3AP61247 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS3AP61247 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.73□□□□□ -0.05
RPS3AP61247 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS3AP61247 AL512356.2-201ENST00000546955 174 ntBASIC14.73□□□□□ -0.05
RPS3AP61247 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.73□□□□□ -0.05
RPS3AP61247 AC024267.1-201ENST00000582320 895 ntBASIC14.73□□□□□ -0.05
RPS3AP61247 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.73□□□□□ -0.05
RPS3AP61247 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 AC093028.1-201ENST00000622998 982 ntBASIC14.73□□□□□ -0.05
RPS3AP61247 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS3AP61247 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms