Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC007389.4-201ENST00000454674 793 ntBASIC16.05■□□□□ 0.16
ATXN3P54252 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.05■□□□□ 0.16
ATXN3P54252 SPDYE18-201ENST00000510091 1050 ntBASIC16.05■□□□□ 0.16
ATXN3P54252 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.05■□□□□ 0.16
ATXN3P54252 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.05■□□□□ 0.16
ATXN3P54252 AL512343.1-201ENST00000605837 169 ntBASIC16.05■□□□□ 0.16
ATXN3P54252 AC099568.2-201ENST00000609194 695 ntBASIC16.05■□□□□ 0.16
ATXN3P54252 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 FAM8A2P-201ENST00000528813 1142 ntBASIC16.04■□□□□ 0.16
ATXN3P54252 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ATXN3P54252 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.04■□□□□ 0.16
ATXN3P54252 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.04■□□□□ 0.16
ATXN3P54252 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
ATXN3P54252 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
ATXN3P54252 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
ATXN3P54252 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ATXN3P54252 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATXN3P54252 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.03■□□□□ 0.16
ATXN3P54252 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.03■□□□□ 0.16
ATXN3P54252 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 AC093726.1-201ENST00000608064 963 ntBASIC16.03■□□□□ 0.16
ATXN3P54252 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.03■□□□□ 0.16
ATXN3P54252 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.03■□□□□ 0.16
ATXN3P54252 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.03■□□□□ 0.16
ATXN3P54252 AC004461.2-201ENST00000629517 803 ntBASIC16.03■□□□□ 0.16
ATXN3P54252 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms