Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDX1P52945 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.16■□□□□ 0.02
PDX1P52945 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDX1P52945 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 AC005229.1-201ENST00000392885 409 ntBASIC15.16■□□□□ 0.02
PDX1P52945 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.16■□□□□ 0.02
PDX1P52945 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 SLED1-202ENST00000512051 380 ntBASIC15.16■□□□□ 0.02
PDX1P52945 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.16■□□□□ 0.02
PDX1P52945 AP001889.1-201ENST00000525414 633 ntBASIC15.16■□□□□ 0.02
PDX1P52945 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.16■□□□□ 0.02
PDX1P52945 AC068587.3-201ENST00000526613 355 ntBASIC15.16■□□□□ 0.02
PDX1P52945 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.16■□□□□ 0.02
PDX1P52945 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.16■□□□□ 0.02
PDX1P52945 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDX1P52945 LINC02447-202ENST00000501888 2146 ntBASIC15.16■□□□□ 0.02
PDX1P52945 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDX1P52945 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.15■□□□□ 0.02
PDX1P52945 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.15■□□□□ 0.02
PDX1P52945 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.15■□□□□ 0.02
PDX1P52945 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PDX1P52945 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 CLUHP6-201ENST00000580789 941 ntBASIC15.15■□□□□ 0.02
PDX1P52945 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms