Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDE6CP51160 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.91■□□□□ 0.3
PDE6CP51160 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDE6CP51160 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 MIR661-201ENST00000384842 89 ntBASIC16.91■□□□□ 0.3
PDE6CP51160 FO393414.2-201ENST00000405153 598 ntBASIC16.91■□□□□ 0.3
PDE6CP51160 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 SERBP1P5-201ENST00000510079 1181 ntBASIC16.91■□□□□ 0.3
PDE6CP51160 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.91■□□□□ 0.3
PDE6CP51160 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6CP51160 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6CP51160 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 KRT8P12-202ENST00000472924 1397 ntBASIC16.9■□□□□ 0.3
PDE6CP51160 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PDE6CP51160 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.9■□□□□ 0.3
PDE6CP51160 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PDE6CP51160 AL844908.2-201ENST00000609461 460 ntBASIC16.9■□□□□ 0.3
PDE6CP51160 AF228730.6-201ENST00000641497 218 ntBASIC16.9■□□□□ 0.3
PDE6CP51160 AC084121.3-201ENST00000641716 218 ntBASIC16.9■□□□□ 0.3
PDE6CP51160 AC105233.6-201ENST00000642093 218 ntBASIC16.9■□□□□ 0.3
PDE6CP51160 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6CP51160 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6CP51160 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6CP51160 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PDE6CP51160 AL607033.1-201ENST00000623900 1599 ntBASIC16.89■□□□□ 0.3
PDE6CP51160 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PDE6CP51160 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6CP51160 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6CP51160 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6CP51160 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDE6CP51160 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms