Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.78□□□□□ -0.2
CX3CR1P49238 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AC211486.1-202ENST00000416371 468 ntBASIC13.78□□□□□ -0.2
CX3CR1P49238 AC136604.1-201ENST00000418535 575 ntBASIC13.78□□□□□ -0.2
CX3CR1P49238 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AC211476.1-201ENST00000503899 468 ntBASIC13.78□□□□□ -0.2
CX3CR1P49238 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.78□□□□□ -0.2
CX3CR1P49238 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AC007967.4-201ENST00000614700 386 ntBASIC13.78□□□□□ -0.2
CX3CR1P49238 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CR1P49238 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CX3CR1P49238 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
CX3CR1P49238 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CX3CR1P49238 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CX3CR1P49238 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CX3CR1P49238 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CX3CR1P49238 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.77□□□□□ -0.21
CX3CR1P49238 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.77□□□□□ -0.21
CX3CR1P49238 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.77□□□□□ -0.21
CX3CR1P49238 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.77□□□□□ -0.21
CX3CR1P49238 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 RN7SL828P-201ENST00000607615 303 ntBASIC13.77□□□□□ -0.21
CX3CR1P49238 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CR1P49238 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CR1P49238 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CR1P49238 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms