Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 AC100850.1-201ENST00000506768 649 ntBASIC14.08□□□□□ -0.16
ATRXP46100 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.08□□□□□ -0.16
ATRXP46100 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 RN7SL713P-201ENST00000582127 302 ntBASIC14.08□□□□□ -0.16
ATRXP46100 AP005212.2-201ENST00000584979 510 ntBASIC14.08□□□□□ -0.16
ATRXP46100 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATRXP46100 AC244157.2-201ENST00000616239 1006 ntBASIC14.08□□□□□ -0.16
ATRXP46100 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 FAM8A4P-201ENST00000435433 1213 ntBASIC14.07□□□□□ -0.16
ATRXP46100 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 AC020922.3-201ENST00000595064 547 ntBASIC14.07□□□□□ -0.16
ATRXP46100 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 AC134407.2-201ENST00000625089 1978 ntBASIC14.07□□□□□ -0.16
ATRXP46100 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.07□□□□□ -0.16
ATRXP46100 AL645933.1-201ENST00000440087 609 ntBASIC14.07□□□□□ -0.16
ATRXP46100 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 AC084752.1-201ENST00000509766 622 ntBASIC14.07□□□□□ -0.16
ATRXP46100 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.07□□□□□ -0.16
ATRXP46100 CTBP2P6-201ENST00000526402 1229 ntBASIC14.07□□□□□ -0.16
ATRXP46100 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.07□□□□□ -0.16
ATRXP46100 AC018846.1-201ENST00000568231 183 ntBASIC14.07□□□□□ -0.16
ATRXP46100 RPL17P45-201ENST00000586289 509 ntBASIC14.07□□□□□ -0.16
ATRXP46100 AC068587.8-201ENST00000641239 219 ntBASIC14.07□□□□□ -0.16
ATRXP46100 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 AC092171.3-201ENST00000610122 2651 ntBASIC14.07□□□□□ -0.16
ATRXP46100 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
ATRXP46100 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
ATRXP46100 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATRXP46100 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.06□□□□□ -0.16
ATRXP46100 AC002472.4-201ENST00000641915 272 ntBASIC14.06□□□□□ -0.16
ATRXP46100 AC004923.1-202ENST00000642106 209 ntBASIC14.06□□□□□ -0.16
ATRXP46100 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 KRT8P4-201ENST00000509735 1454 ntBASIC14.06□□□□□ -0.16
ATRXP46100 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms