Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 AC003101.2-201ENST00000612557 442 ntBASIC16.71■□□□□ 0.27
SSR1P43307 AC055717.3-201ENST00000622967 595 ntBASIC16.71■□□□□ 0.27
SSR1P43307 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SSR1P43307 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.71■□□□□ 0.27
SSR1P43307 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.71■□□□□ 0.26
SSR1P43307 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSR1P43307 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSR1P43307 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSR1P43307 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.71■□□□□ 0.26
SSR1P43307 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SSR1P43307 KRT8P37-201ENST00000451609 1420 ntBASIC16.7■□□□□ 0.26
SSR1P43307 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.7■□□□□ 0.26
SSR1P43307 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 TMBIM7P-203ENST00000641617 1718 ntBASIC16.7■□□□□ 0.26
SSR1P43307 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SSR1P43307 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SSR1P43307 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.7■□□□□ 0.26
SSR1P43307 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.7■□□□□ 0.26
SSR1P43307 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.7■□□□□ 0.26
SSR1P43307 AL450472.2-201ENST00000603663 1156 ntBASIC16.7■□□□□ 0.26
SSR1P43307 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.7■□□□□ 0.26
SSR1P43307 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SSR1P43307 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
SSR1P43307 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSR1P43307 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.7■□□□□ 0.26
SSR1P43307 AC105250.1-201ENST00000509378 2057 ntBASIC16.69■□□□□ 0.26
SSR1P43307 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 AC090616.6-203ENST00000579186 1945 ntBASIC16.69■□□□□ 0.26
SSR1P43307 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
SSR1P43307 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 BX842568.4-201ENST00000421222 227 ntBASIC16.69■□□□□ 0.26
SSR1P43307 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 AL353705.2-201ENST00000428243 662 ntBASIC16.69■□□□□ 0.26
SSR1P43307 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 ALG1L8P-201ENST00000533887 760 ntBASIC16.69■□□□□ 0.26
SSR1P43307 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms