Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.11■□□□□ 0.33
USP8P40818 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 AL450472.2-201ENST00000603663 1156 ntBASIC17.11■□□□□ 0.33
USP8P40818 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 DNAJB3-202ENST00000449667 1266 ntBASIC17.1■□□□□ 0.33
USP8P40818 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.1■□□□□ 0.33
USP8P40818 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.1■□□□□ 0.33
USP8P40818 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
USP8P40818 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.1■□□□□ 0.33
USP8P40818 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP8P40818 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP8P40818 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.09■□□□□ 0.33
USP8P40818 AP006288.1-201ENST00000446065 395 ntBASIC17.09■□□□□ 0.33
USP8P40818 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 PHKG1P2-201ENST00000457537 863 ntBASIC17.09■□□□□ 0.33
USP8P40818 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms