Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.8□□□□□ -0.36
CEACAM3P40198 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC009477.1-201ENST00000452936 217 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 AC004890.2-204ENST00000481968 304 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC044860.1-202ENST00000559481 777 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.8□□□□□ -0.36
CEACAM3P40198 MIR4313-201ENST00000580760 101 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.8□□□□□ -0.36
CEACAM3P40198 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.8□□□□□ -0.36
CEACAM3P40198 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC009118.2-201ENST00000613275 655 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 AJ011932.1-201ENST00000621707 465 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CEACAM3P40198 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 AL607033.1-201ENST00000623900 1599 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.79□□□□□ -0.36
CEACAM3P40198 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AC015922.1-201ENST00000421102 1152 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.79□□□□□ -0.36
CEACAM3P40198 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AC135586.1-201ENST00000539323 574 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 AC097359.3-201ENST00000603982 1210 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CEACAM3P40198 OR2I1P-210ENST00000642037 4691 ntBASIC12.79□□□□□ -0.36
CEACAM3P40198 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CEACAM3P40198 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.79□□□□□ -0.36
CEACAM3P40198 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms