Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
RORAP35398 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
RORAP35398 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
RORAP35398 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.85□□□□□ -0.03
RORAP35398 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 INTS4P2-202ENST00000614726 2019 ntBASIC14.85□□□□□ -0.03
RORAP35398 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.85□□□□□ -0.03
RORAP35398 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 RPL13AP25-201ENST00000484130 612 ntBASIC14.85□□□□□ -0.03
RORAP35398 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.85□□□□□ -0.03
RORAP35398 USP32P1-208ENST00000506594 1164 ntBASIC14.85□□□□□ -0.03
RORAP35398 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 AL512343.1-201ENST00000605837 169 ntBASIC14.85□□□□□ -0.03
RORAP35398 MIR6805-201ENST00000615055 62 ntBASIC14.85□□□□□ -0.03
RORAP35398 CU634019.7-201ENST00000624153 1185 ntBASIC14.85□□□□□ -0.03
RORAP35398 FP236241.2-201ENST00000624906 1185 ntBASIC14.85□□□□□ -0.03
RORAP35398 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.85□□□□□ -0.03
RORAP35398 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.85□□□□□ -0.03
RORAP35398 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RORAP35398 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 AC010491.1-201ENST00000563101 2797 ntBASIC14.84□□□□□ -0.03
RORAP35398 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 AL121723.1-201ENST00000445194 1519 ntBASIC14.84□□□□□ -0.03
RORAP35398 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.84□□□□□ -0.03
RORAP35398 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.84□□□□□ -0.03
RORAP35398 MIR1909-201ENST00000411312 80 ntBASIC14.84□□□□□ -0.03
RORAP35398 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 AC022210.1-201ENST00000449856 793 ntBASIC14.84□□□□□ -0.03
RORAP35398 KRT18P43-201ENST00000469825 1281 ntBASIC14.84□□□□□ -0.03
RORAP35398 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.84□□□□□ -0.03
RORAP35398 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.84□□□□□ -0.03
RORAP35398 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.84□□□□□ -0.03
RORAP35398 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.84□□□□□ -0.03
RORAP35398 AL049840.4-201ENST00000602422 811 ntBASIC14.84□□□□□ -0.03
RORAP35398 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.84□□□□□ -0.03
RORAP35398 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.84□□□□□ -0.03
RORAP35398 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RORAP35398 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.84□□□□□ -0.03
RORAP35398 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RORAP35398 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RORAP35398 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RORAP35398 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RORAP35398 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.83□□□□□ -0.03
RORAP35398 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RORAP35398 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms