Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 AC134407.2-201ENST00000625089 1978 ntBASIC14.67□□□□□ -0.06
CHMP24386 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC007292.2-201ENST00000593524 1812 ntBASIC14.66□□□□□ -0.06
CHMP24386 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHMP24386 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHMP24386 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 AC055876.3-201ENST00000431496 288 ntBASIC14.66□□□□□ -0.06
CHMP24386 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.66□□□□□ -0.06
CHMP24386 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.66□□□□□ -0.06
CHMP24386 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CHMP24386 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.66□□□□□ -0.06
CHMP24386 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.66□□□□□ -0.06
CHMP24386 AC105021.1-202ENST00000570572 669 ntBASIC14.66□□□□□ -0.06
CHMP24386 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC092364.2-202ENST00000597012 1073 ntBASIC14.66□□□□□ -0.06
CHMP24386 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.66□□□□□ -0.06
CHMP24386 AL096865.1-201ENST00000606796 927 ntBASIC14.66□□□□□ -0.06
CHMP24386 AC138649.4-201ENST00000612222 287 ntBASIC14.66□□□□□ -0.06
CHMP24386 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
CHMP24386 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP24386 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP24386 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHMP24386 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP24386 AC009090.5-201ENST00000624886 2285 ntBASIC14.66□□□□□ -0.06
CHMP24386 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP24386 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP24386 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHMP24386 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP24386 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP24386 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP24386 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP24386 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP24386 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP24386 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP24386 SPCS2P1-201ENST00000561636 679 ntBASIC14.65□□□□□ -0.06
CHMP24386 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP24386 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP24386 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP24386 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP24386 RN7SL828P-201ENST00000607615 303 ntBASIC14.65□□□□□ -0.06
CHMP24386 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms