Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 AC026748.1-201ENST00000624349 3251 ntBASIC15.62■□□□□ 0.09
XRCC1P18887 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.62■□□□□ 0.09
XRCC1P18887 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
XRCC1P18887 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.62■□□□□ 0.09
XRCC1P18887 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.62■□□□□ 0.09
XRCC1P18887 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 AC135586.1-201ENST00000539323 574 ntBASIC15.62■□□□□ 0.09
XRCC1P18887 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.62■□□□□ 0.09
XRCC1P18887 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.62■□□□□ 0.09
XRCC1P18887 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.62■□□□□ 0.09
XRCC1P18887 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XRCC1P18887 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.62■□□□□ 0.09
XRCC1P18887 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
XRCC1P18887 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 PIN1P1-201ENST00000412108 996 ntBASIC15.61■□□□□ 0.09
XRCC1P18887 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
XRCC1P18887 HIST3H2BA-201ENST00000436555 524 ntBASIC15.61■□□□□ 0.09
XRCC1P18887 AC114501.2-201ENST00000439631 535 ntBASIC15.61■□□□□ 0.09
XRCC1P18887 EEF1DP4-201ENST00000446006 880 ntBASIC15.61■□□□□ 0.09
XRCC1P18887 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.61■□□□□ 0.09
XRCC1P18887 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.61■□□□□ 0.09
XRCC1P18887 AC044860.1-202ENST00000559481 777 ntBASIC15.61■□□□□ 0.09
XRCC1P18887 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.61■□□□□ 0.09
XRCC1P18887 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XRCC1P18887 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
XRCC1P18887 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
XRCC1P18887 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms