Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CTSDP07339 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.02□□□□□ -0.32
CTSDP07339 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.02□□□□□ -0.33
CTSDP07339 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.02□□□□□ -0.33
CTSDP07339 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.02□□□□□ -0.33
CTSDP07339 AC010507.1-201ENST00000633895 436 ntBASIC13.02□□□□□ -0.33
CTSDP07339 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.02□□□□□ -0.33
CTSDP07339 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.02□□□□□ -0.33
CTSDP07339 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTSDP07339 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.02□□□□□ -0.33
CTSDP07339 BX640514.1-201ENST00000583223 1918 ntBASIC13.01□□□□□ -0.33
CTSDP07339 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CTSDP07339 EEF1DP4-201ENST00000446006 880 ntBASIC13.01□□□□□ -0.33
CTSDP07339 HCG4B-203ENST00000450128 991 ntBASIC13.01□□□□□ -0.33
CTSDP07339 AF186996.4-201ENST00000467186 377 ntBASIC13.01□□□□□ -0.33
CTSDP07339 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 AC011467.4-201ENST00000594891 528 ntBASIC13.01□□□□□ -0.33
CTSDP07339 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
CTSDP07339 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CTSDP07339 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CTSDP07339 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CTSDP07339 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.01□□□□□ -0.33
CTSDP07339 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTSDP07339 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13□□□□□ -0.33
CTSDP07339 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CTSDP07339 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CTSDP07339 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13□□□□□ -0.33
CTSDP07339 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
CTSDP07339 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CTSDP07339 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms