Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.58■□□□□ 0.41
TPM3P06753 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.58■□□□□ 0.4
TPM3P06753 VN2R19P-201ENST00000442399 1052 ntBASIC17.58■□□□□ 0.4
TPM3P06753 AC018712.1-201ENST00000455767 687 ntBASIC17.58■□□□□ 0.4
TPM3P06753 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.58■□□□□ 0.4
TPM3P06753 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 AC012640.2-201ENST00000561606 901 ntBASIC17.58■□□□□ 0.4
TPM3P06753 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.58■□□□□ 0.4
TPM3P06753 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TPM3P06753 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 IFNL4P1-201ENST00000607083 540 ntBASIC17.58■□□□□ 0.4
TPM3P06753 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TPM3P06753 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.58■□□□□ 0.4
TPM3P06753 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.58■□□□□ 0.4
TPM3P06753 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.58■□□□□ 0.4
TPM3P06753 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM3P06753 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.57■□□□□ 0.4
TPM3P06753 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM3P06753 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TPM3P06753 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TPM3P06753 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TPM3P06753 KRT18P67-201ENST00000432816 1264 ntBASIC17.57■□□□□ 0.4
TPM3P06753 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.57■□□□□ 0.4
TPM3P06753 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.57■□□□□ 0.4
TPM3P06753 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TPM3P06753 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TPM3P06753 AC007064.4-201ENST00000637740 555 ntBASIC17.57■□□□□ 0.4
TPM3P06753 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TPM3P06753 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM3P06753 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TPM3P06753 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TPM3P06753 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.56■□□□□ 0.4
TPM3P06753 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms