Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KRT18P66-201ENST00000452970 1269 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.05■□□□□ 0.8
COL5A2P05997 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.05■□□□□ 0.8
COL5A2P05997 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC138894.2-201ENST00000602838 371 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 AC087045.2-201ENST00000606279 1003 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 Z98259.2-201ENST00000641583 609 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC244394.1-201ENST00000435000 1665 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 AL008718.2-201ENST00000609206 1313 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 AC078991.1-201ENST00000437297 610 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 PGAM1P5-201ENST00000548011 764 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.05■□□□□ 0.8
COL5A2P05997 AC092171.5-201ENST00000608012 942 ntBASIC20.05■□□□□ 0.8
COL5A2P05997 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL5A2P05997 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
COL5A2P05997 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.04■□□□□ 0.8
COL5A2P05997 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL5A2P05997 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 RN7SKP230-201ENST00000365642 335 ntBASIC20.04■□□□□ 0.8
COL5A2P05997 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.04■□□□□ 0.8
COL5A2P05997 FAM58BP-201ENST00000439056 645 ntBASIC20.04■□□□□ 0.8
COL5A2P05997 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.04■□□□□ 0.8
COL5A2P05997 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.04■□□□□ 0.8
COL5A2P05997 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL5A2P05997 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL5A2P05997 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.03■□□□□ 0.8
COL5A2P05997 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
COL5A2P05997 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.03■□□□□ 0.8
COL5A2P05997 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL5A2P05997 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.03■□□□□ 0.8
COL5A2P05997 CTBP2P4-201ENST00000513884 920 ntBASIC20.03■□□□□ 0.8
COL5A2P05997 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC20.03■□□□□ 0.8
COL5A2P05997 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.03■□□□□ 0.8
COL5A2P05997 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.03■□□□□ 0.8
COL5A2P05997 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms