Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 MIR4321-201ENST00000592276 80 ntBASIC14.12□□□□□ -0.15
HLA-DPB1P04440 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 YBX2P1-201ENST00000394192 760 ntBASIC14.11□□□□□ -0.15
HLA-DPB1P04440 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DPB1P04440 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms