Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.02■□□□□ 0.32
VTNP04004 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.02■□□□□ 0.32
VTNP04004 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 AC145423.3-201ENST00000615987 467 ntBASIC17.02■□□□□ 0.32
VTNP04004 AL354718.3-201ENST00000616414 581 ntBASIC17.02■□□□□ 0.32
VTNP04004 CR382287.1-201ENST00000623954 586 ntBASIC17.02■□□□□ 0.32
VTNP04004 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.02■□□□□ 0.32
VTNP04004 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.02■□□□□ 0.31
VTNP04004 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTNP04004 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VTNP04004 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.02■□□□□ 0.31
VTNP04004 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VTNP04004 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 KRT8P35-201ENST00000483942 1338 ntBASIC17.01■□□□□ 0.31
VTNP04004 DOC2GP-204ENST00000639052 2548 ntBASIC17.01■□□□□ 0.31
VTNP04004 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 RNU1-114P-201ENST00000365297 166 ntBASIC17.01■□□□□ 0.31
VTNP04004 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.01■□□□□ 0.31
VTNP04004 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.01■□□□□ 0.31
VTNP04004 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.01■□□□□ 0.31
VTNP04004 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.01■□□□□ 0.31
VTNP04004 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.01■□□□□ 0.31
VTNP04004 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.01■□□□□ 0.31
VTNP04004 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.01■□□□□ 0.31
VTNP04004 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VTNP04004 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 AC026691.1-201ENST00000602502 2017 ntBASIC17.01■□□□□ 0.31
VTNP04004 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTNP04004 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 FAM86MP-201ENST00000340703 885 ntBASIC17■□□□□ 0.31
VTNP04004 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VTNP04004 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17■□□□□ 0.31
VTNP04004 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17■□□□□ 0.31
VTNP04004 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VTNP04004 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17■□□□□ 0.31
VTNP04004 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17■□□□□ 0.31
VTNP04004 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17■□□□□ 0.31
VTNP04004 AC025279.2-201ENST00000569730 653 ntBASIC17■□□□□ 0.31
VTNP04004 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17■□□□□ 0.31
VTNP04004 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17■□□□□ 0.31
VTNP04004 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VTNP04004 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17■□□□□ 0.31
VTNP04004 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17■□□□□ 0.31
VTNP04004 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VTNP04004 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTNP04004 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.99■□□□□ 0.31
VTNP04004 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms