Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.59■□□□□ 0.25
TIMP1P01033 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.59■□□□□ 0.25
TIMP1P01033 RPSAP31-201ENST00000416648 895 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP1P01033 AC090857.1-201ENST00000527400 390 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.59■□□□□ 0.25
TIMP1P01033 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.59■□□□□ 0.25
TIMP1P01033 AC009955.4-201ENST00000597192 544 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 AL358472.3-201ENST00000608147 415 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 NAP1L6-202ENST00000641404 1222 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 FKBP4P6-201ENST00000457486 1332 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 AP000593.2-201ENST00000542775 1433 ntBASIC16.59■□□□□ 0.25
TIMP1P01033 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP1P01033 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TIMP1P01033 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.58■□□□□ 0.25
TIMP1P01033 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.58■□□□□ 0.25
TIMP1P01033 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP1P01033 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 RPL18P13-201ENST00000478088 569 ntBASIC16.58■□□□□ 0.24
TIMP1P01033 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.58■□□□□ 0.24
TIMP1P01033 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.58■□□□□ 0.24
TIMP1P01033 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 AC135983.4-201ENST00000564116 1262 ntBASIC16.58■□□□□ 0.24
TIMP1P01033 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.58■□□□□ 0.24
TIMP1P01033 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 AL132994.2-201ENST00000603120 687 ntBASIC16.58■□□□□ 0.24
TIMP1P01033 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.58■□□□□ 0.24
TIMP1P01033 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
TIMP1P01033 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TIMP1P01033 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms