Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC4O95801 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TTC4O95801 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TTC4O95801 ACTG1P14-201ENST00000446382 1122 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.08■□□□□ 0.16
TTC4O95801 SPDYE11-202ENST00000450699 704 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AL139010.1-201ENST00000454878 894 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 AC243562.1-201ENST00000560672 389 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AP000842.3-202ENST00000569238 1080 ntBASIC16.08■□□□□ 0.16
TTC4O95801 SPDYE9P-201ENST00000570642 692 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AC026979.3-201ENST00000607315 403 ntBASIC16.08■□□□□ 0.16
TTC4O95801 AC026120.1-201ENST00000611536 926 ntBASIC16.08■□□□□ 0.16
TTC4O95801 SPDYE10P-202ENST00000612005 668 ntBASIC16.08■□□□□ 0.16
TTC4O95801 SPDYE8P-202ENST00000612377 668 ntBASIC16.08■□□□□ 0.16
TTC4O95801 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TTC4O95801 PCDHA3-202ENST00000532566 4594 ntBASIC16.08■□□□□ 0.16
TTC4O95801 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC4O95801 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC4O95801 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC4O95801 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC4O95801 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.07■□□□□ 0.16
TTC4O95801 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.07■□□□□ 0.16
TTC4O95801 AC040169.1-201ENST00000565382 521 ntBASIC16.07■□□□□ 0.16
TTC4O95801 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TTC4O95801 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 AL136982.4-201ENST00000437689 1740 ntBASIC16.07■□□□□ 0.16
TTC4O95801 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC4O95801 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC4O95801 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC4O95801 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TTC4O95801 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TTC4O95801 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.06■□□□□ 0.16
TTC4O95801 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TTC4O95801 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC4O95801 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.06■□□□□ 0.16
TTC4O95801 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC4O95801 MCCD1P2-201ENST00000423228 335 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms