Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MIR3907-201ENST00000579424 151 ntBASIC20.19■□□□□ 0.82
LTN1O94822 PCDHB19P-201ENST00000570871 2371 ntBASIC20.19■□□□□ 0.82
LTN1O94822 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.19■□□□□ 0.82
LTN1O94822 LINC02199-201ENST00000506655 2702 ntBASIC20.19■□□□□ 0.82
LTN1O94822 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.18■□□□□ 0.82
LTN1O94822 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.18■□□□□ 0.82
LTN1O94822 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 AC090616.6-203ENST00000579186 1945 ntBASIC20.18■□□□□ 0.82
LTN1O94822 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 FTLP1-201ENST00000449155 526 ntBASIC20.18■□□□□ 0.82
LTN1O94822 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.18■□□□□ 0.82
LTN1O94822 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 AL136301.1-201ENST00000615830 422 ntBASIC20.18■□□□□ 0.82
LTN1O94822 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTN1O94822 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.18■□□□□ 0.82
LTN1O94822 KRT8P29-201ENST00000420409 1371 ntBASIC20.18■□□□□ 0.82
LTN1O94822 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.18■□□□□ 0.82
LTN1O94822 AC020916.1-201ENST00000587762 1774 ntBASIC20.17■□□□□ 0.82
LTN1O94822 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LTN1O94822 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LTN1O94822 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 RN7SKP230-201ENST00000365642 335 ntBASIC20.17■□□□□ 0.82
LTN1O94822 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.17■□□□□ 0.82
LTN1O94822 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.17■□□□□ 0.82
LTN1O94822 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.17■□□□□ 0.82
LTN1O94822 AC005962.1-201ENST00000584100 773 ntBASIC20.17■□□□□ 0.82
LTN1O94822 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.17■□□□□ 0.82
LTN1O94822 YRDCP1-201ENST00000621419 643 ntBASIC20.17■□□□□ 0.82
LTN1O94822 AL162426.1-201ENST00000624141 743 ntBASIC20.17■□□□□ 0.82
LTN1O94822 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LTN1O94822 CICP11-201ENST00000434745 2827 ntBASIC20.17■□□□□ 0.82
LTN1O94822 E2F3P2-201ENST00000447755 1422 ntBASIC20.17■□□□□ 0.82
LTN1O94822 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.17■□□□□ 0.82
LTN1O94822 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTN1O94822 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.17■□□□□ 0.82
LTN1O94822 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.16■□□□□ 0.82
LTN1O94822 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.16■□□□□ 0.82
LTN1O94822 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.16■□□□□ 0.82
LTN1O94822 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 RCC2P8-201ENST00000502779 1035 ntBASIC20.16■□□□□ 0.82
LTN1O94822 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.16■□□□□ 0.82
LTN1O94822 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 AC018635.2-201ENST00000608625 364 ntBASIC20.16■□□□□ 0.82
LTN1O94822 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.16■□□□□ 0.82
LTN1O94822 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 AC100757.4-201ENST00000626934 759 ntBASIC20.16■□□□□ 0.82
LTN1O94822 AL805961.1-203ENST00000641078 1258 ntBASIC20.16■□□□□ 0.82
LTN1O94822 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.16■□□□□ 0.82
LTN1O94822 AC244394.1-201ENST00000435000 1665 ntBASIC20.16■□□□□ 0.82
LTN1O94822 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.16■□□□□ 0.82
LTN1O94822 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms