Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH4O75427 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH4O75427 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH4O75427 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 SPDYE18-201ENST00000510091 1050 ntBASIC16.23■□□□□ 0.19
LRCH4O75427 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.23■□□□□ 0.19
LRCH4O75427 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
LRCH4O75427 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH4O75427 AC025181.2-201ENST00000606994 802 ntBASIC16.23■□□□□ 0.19
LRCH4O75427 AC008738.7-201ENST00000609744 511 ntBASIC16.23■□□□□ 0.19
LRCH4O75427 AC004840.1-201ENST00000636359 365 ntBASIC16.23■□□□□ 0.19
LRCH4O75427 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH4O75427 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 LINC00528-201ENST00000600723 2160 ntBASIC16.23■□□□□ 0.19
LRCH4O75427 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH4O75427 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH4O75427 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRCH4O75427 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH4O75427 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRCH4O75427 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRCH4O75427 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRCH4O75427 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH4O75427 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.22■□□□□ 0.19
LRCH4O75427 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.22■□□□□ 0.19
LRCH4O75427 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.22■□□□□ 0.19
LRCH4O75427 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.22■□□□□ 0.19
LRCH4O75427 AC000095.1-201ENST00000603208 874 ntBASIC16.22■□□□□ 0.19
LRCH4O75427 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRCH4O75427 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH4O75427 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRCH4O75427 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRCH4O75427 AC022144.1-201ENST00000602255 1580 ntBASIC16.21■□□□□ 0.19
LRCH4O75427 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRCH4O75427 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH4O75427 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.21■□□□□ 0.19
LRCH4O75427 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH4O75427 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH4O75427 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
LRCH4O75427 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms