Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH16O75309 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH16O75309 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH16O75309 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH16O75309 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 CYP4F24P-201ENST00000586049 1580 ntBASIC15.83■□□□□ 0.13
CDH16O75309 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH16O75309 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH16O75309 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH16O75309 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH16O75309 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH16O75309 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH16O75309 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
CDH16O75309 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 AC079776.4-201ENST00000511039 504 ntBASIC15.83■□□□□ 0.12
CDH16O75309 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH16O75309 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 AL138918.1-201ENST00000568306 659 ntBASIC15.83■□□□□ 0.12
CDH16O75309 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH16O75309 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH16O75309 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 AC025580.3-201ENST00000617932 1424 ntBASIC15.83■□□□□ 0.12
CDH16O75309 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH16O75309 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH16O75309 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH16O75309 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.82■□□□□ 0.12
CDH16O75309 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH16O75309 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH16O75309 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 BX640514.1-201ENST00000583223 1918 ntBASIC15.82■□□□□ 0.12
CDH16O75309 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH16O75309 REXO1L2P-201ENST00000425429 2069 ntBASIC15.82■□□□□ 0.12
CDH16O75309 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH16O75309 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDH16O75309 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH16O75309 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH16O75309 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH16O75309 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH16O75309 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH16O75309 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH16O75309 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH16O75309 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms