Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 AC117489.1-201ENST00000625169 3217 ntBASIC15.34■□□□□ 0.05
PEX1O43933 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.33■□□□□ 0.05
PEX1O43933 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.33■□□□□ 0.05
PEX1O43933 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.33■□□□□ 0.05
PEX1O43933 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PEX1O43933 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PEX1O43933 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.33■□□□□ 0.04
PEX1O43933 AC005237.2-201ENST00000434368 219 ntBASIC15.33■□□□□ 0.04
PEX1O43933 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.33■□□□□ 0.04
PEX1O43933 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 RN7SL589P-201ENST00000481268 310 ntBASIC15.33■□□□□ 0.04
PEX1O43933 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.33■□□□□ 0.04
PEX1O43933 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.33■□□□□ 0.04
PEX1O43933 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 AC131009.4-201ENST00000624048 1740 ntBASIC15.33■□□□□ 0.04
PEX1O43933 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PEX1O43933 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.33■□□□□ 0.04
PEX1O43933 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEX1O43933 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.33■□□□□ 0.04
PEX1O43933 PCDHA3-202ENST00000532566 4594 ntBASIC15.33■□□□□ 0.04
PEX1O43933 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
PEX1O43933 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 CICP14-201ENST00000629111 2732 ntBASIC15.32■□□□□ 0.04
PEX1O43933 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 AC005840.4-201ENST00000541242 2494 ntBASIC15.32■□□□□ 0.04
PEX1O43933 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 C18orf15-201ENST00000623680 2534 ntBASIC15.32■□□□□ 0.04
PEX1O43933 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 AL139400.1-201ENST00000366220 510 ntBASIC15.32■□□□□ 0.04
PEX1O43933 AC092474.2-201ENST00000424288 719 ntBASIC15.32■□□□□ 0.04
PEX1O43933 AC023141.5-201ENST00000458585 616 ntBASIC15.32■□□□□ 0.04
PEX1O43933 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 AC079140.1-201ENST00000508039 487 ntBASIC15.32■□□□□ 0.04
PEX1O43933 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 RFPL4AP1-201ENST00000530883 850 ntBASIC15.32■□□□□ 0.04
PEX1O43933 AC109635.5-201ENST00000533593 962 ntBASIC15.32■□□□□ 0.04
PEX1O43933 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 AL135744.1-201ENST00000565098 629 ntBASIC15.32■□□□□ 0.04
PEX1O43933 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.32■□□□□ 0.04
PEX1O43933 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 AKAP8P1-201ENST00000434743 1349 ntBASIC15.32■□□□□ 0.04
PEX1O43933 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PEX1O43933 ST20-AS1-201ENST00000560255 4223 ntBASIC15.32■□□□□ 0.04
PEX1O43933 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
PEX1O43933 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 705.2 ms