Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 MBLAC2-202ENST00000514906 1936 ntBASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AL583805.1-201ENST00000391389 531 ntBASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AC010141.1-201ENST00000411585 623 ntBASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 AC004466.1-201ENST00000599515 1080 ntBASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM88BA6NKF7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 HIST2H2BA-201ENST00000412169 381 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC092638.2-201ENST00000441105 947 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 SCARNA21-201ENST00000517026 139 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 NUDT4P2-201ENST00000578341 546 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 MIR4522-201ENST00000584932 87 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 MEG3_2.1-201ENST00000611456 105 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC025262.2-201ENST00000623975 1056 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC138466.5-201ENST00000624002 808 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 AC005618.3-201ENST00000624928 458 ntBASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEM88BA6NKF7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 FRMPD2B-201ENST00000431305 1347 ntBASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AL008718.2-201ENST00000609206 1313 ntBASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AL357373.1-201ENST00000394974 322 ntBASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AC078875.1-201ENST00000431907 724 ntBASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AC004837.1-201ENST00000446267 564 ntBASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 NDUFS6P1-201ENST00000485187 316 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms