Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
TVP23AA6NH52 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TVP23AA6NH52 AL607033.1-201ENST00000623900 1599 ntBASIC14.02□□□□□ -0.16
TVP23AA6NH52 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TVP23AA6NH52 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TVP23AA6NH52 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 EEF1DP4-201ENST00000446006 880 ntBASIC14.02□□□□□ -0.17
TVP23AA6NH52 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AC097359.3-201ENST00000603982 1210 ntBASIC14.02□□□□□ -0.17
TVP23AA6NH52 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AC007686.3-201ENST00000619017 3487 ntBASIC14.02□□□□□ -0.17
TVP23AA6NH52 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 AC106881.1-201ENST00000605849 3329 ntBASIC14.02□□□□□ -0.17
TVP23AA6NH52 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.02□□□□□ -0.17
TVP23AA6NH52 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TVP23AA6NH52 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC022145.2-201ENST00000598203 171 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC105339.1-204ENST00000636249 355 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC084121.4-201ENST00000641598 221 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 AF228730.8-201ENST00000642140 221 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 AC023024.2-201ENST00000623561 1993 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 ELL2P1-201ENST00000413990 1906 ntBASIC14.01□□□□□ -0.17
TVP23AA6NH52 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TVP23AA6NH52 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 AGAP7P-201ENST00000582299 2062 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 AGAP14-201ENST00000624701 2060 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms