Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AL138918.1-201ENST00000568306 659 ntBASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 MIR3652-201ENST00000579335 131 ntBASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AC010507.1-201ENST00000633895 436 ntBASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV3S1A0A5B6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 HCG4B-203ENST00000450128 991 ntBASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 AC018712.1-201ENST00000455767 687 ntBASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 AL359183.1-201ENST00000623796 2132 ntBASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms