Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 U1.21-201ENST00000580816 167 ntBASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 AC020765.3-201ENST00000613051 740 ntBASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 AC091812.2-201ENST00000619081 385 ntBASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 AL161645.1-201ENST00000622716 1255 ntBASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4B1Q9Y6B7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC148477.4-201ENST00000613430 1793 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC140479.7-201ENST00000636301 2332 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 YBX1P5-201ENST00000509441 847 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AL009183.1-201ENST00000603760 355 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AL031055.1-201ENST00000606362 631 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AL078644.1-201ENST00000609881 752 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4B1Q9Y6B7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP4B1Q9Y6B7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.08■□□□□ 0.01
AP4B1Q9Y6B7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
AP4B1Q9Y6B7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.08■□□□□ 0.01
AP4B1Q9Y6B7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP4B1Q9Y6B7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 AC021097.1-201ENST00000607902 574 ntBASIC15.08■□□□□ 0
AP4B1Q9Y6B7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms