Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
L1RE1Q9UN81 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
L1RE1Q9UN81 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.12■□□□□ 0.33
L1RE1Q9UN81 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.12■□□□□ 0.33
L1RE1Q9UN81 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
L1RE1Q9UN81 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 FO393414.2-201ENST00000405153 598 ntBASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AZGP1P1-201ENST00000411909 902 ntBASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC138761.1-201ENST00000584393 385 ntBASIC17.11■□□□□ 0.33
L1RE1Q9UN81 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
L1RE1Q9UN81 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms