Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC123567.1-201ENST00000548294 1261 ntBASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC190387.1-201ENST00000551683 408 ntBASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 AC098850.1-201ENST00000419919 790 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 GAPDHP40-201ENST00000505218 1006 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 BRI3BPP1-201ENST00000594224 787 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 AL049840.4-201ENST00000602422 811 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 AL645728.2-202ENST00000641679 227 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 CICP11-201ENST00000434745 2827 ntBASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHA4Q9UN74 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC104596.2-201ENST00000512793 793 ntBASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC138761.1-201ENST00000584393 385 ntBASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC006486.2-201ENST00000624246 2199 ntBASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC148477.4-201ENST00000613430 1793 ntBASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms