Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 TERF1P3-201ENST00000505638 1227 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 TIMM17BP1-201ENST00000545713 516 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 LINC02560-201ENST00000596379 459 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCMF1Q9P0J7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AC138969.3-201ENST00000546612 1459 ntBASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AC138932.2-201ENST00000548268 1459 ntBASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AC126755.4-201ENST00000549796 1459 ntBASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 DBET-201ENST00000630918 3363 ntBASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 MEIS3P1-201ENST00000495167 958 ntBASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCMF1Q9P0J7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 FAM207CP-201ENST00000443486 507 ntBASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AC104794.3-201ENST00000566840 1248 ntBASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AL391069.4-201ENST00000609583 481 ntBASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AC008761.3-201ENST00000624803 892 ntBASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms