Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 MTX1P1-201ENST00000440904 838 ntBASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 RPSAP36-202ENST00000494591 1261 ntBASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AC104982.3-201ENST00000581995 514 ntBASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC10Q9NYD6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 KRT8P14-201ENST00000414254 1442 ntBASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC004898.1-201ENST00000451057 766 ntBASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC244452.3-201ENST00000636814 210 ntBASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC10Q9NYD6 AC006449.5-201ENST00000610658 2098 ntBASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms