Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 DOC2GP-204ENST00000639052 2548 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 NMNAT1P2-201ENST00000435192 860 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 NPM1P19-201ENST00000450070 712 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 CXCL1P1-201ENST00000502804 216 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AP000344.2-201ENST00000512987 629 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC090819.1-201ENST00000523800 1111 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AP003717.3-201ENST00000544832 1180 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 VN1R9P-201ENST00000614184 867 ntBASIC18.78■□□□□ 0.6
RNF216Q9NWF9 TEX41-255ENST00000626404 610 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF216Q9NWF9 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC090984.1-201ENST00000623172 1332 ntBASIC18.77■□□□□ 0.6
RNF216Q9NWF9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AL356320.2-201ENST00000417263 507 ntBASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AP001596.1-203ENST00000421771 1078 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AL591719.1-201ENST00000444669 744 ntBASIC18.77■□□□□ 0.6
RNF216Q9NWF9 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AP002472.1-201ENST00000577490 586 ntBASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF216Q9NWF9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms