Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 AC004461.1-201ENST00000412461 403 ntBASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CNN2P11-201ENST00000429351 262 ntBASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 DNAJB3-202ENST00000449667 1266 ntBASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AL645939.2-201ENST00000427340 991 ntBASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC005237.2-201ENST00000434368 219 ntBASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIN7CQ9NUP9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms