Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MIR4538-201ENST00000581377 78 ntBASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 AC007950.2-201ENST00000615045 2347 ntBASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 AC092933.1-201ENST00000393644 945 ntBASIC16.18■□□□□ 0.18
HPS4Q9NQG7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 AC000095.1-201ENST00000603208 874 ntBASIC16.18■□□□□ 0.18
HPS4Q9NQG7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 MSTO2P-201ENST00000314835 1709 ntBASIC16.18■□□□□ 0.18
HPS4Q9NQG7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS4Q9NQG7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.17■□□□□ 0.18
HPS4Q9NQG7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms