Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC4Q9HBW1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AC104596.2-201ENST00000512793 793 ntBASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 API5-211ENST00000534695 560 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 AC099568.2-201ENST00000609194 695 ntBASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 CLK3P2-201ENST00000427566 1453 ntBASIC16.48■□□□□ 0.23
LRRC4Q9HBW1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AC105250.1-201ENST00000509378 2057 ntBASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 CRB3P1-201ENST00000449338 276 ntBASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 RN7SL399P-201ENST00000471648 279 ntBASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AL391069.4-201ENST00000609583 481 ntBASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC4Q9HBW1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4Q9HBW1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms