Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 AC022188.1-201ENST00000620960 1664 ntBASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 AC007969.1-201ENST00000433675 447 ntBASIC18.2■□□□□ 0.5
EFCC1Q9HA90 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 U62317.3-201ENST00000608319 855 ntBASIC18.2■□□□□ 0.5
EFCC1Q9HA90 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 CNN2P8-201ENST00000421872 913 ntBASIC18.19■□□□□ 0.5
EFCC1Q9HA90 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 AL591846.1-201ENST00000451736 433 ntBASIC18.19■□□□□ 0.5
EFCC1Q9HA90 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 MIR4706-201ENST00000582134 82 ntBASIC18.19■□□□□ 0.5
EFCC1Q9HA90 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
EFCC1Q9HA90 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms